STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2229ABC-type sugar transporter, periplasmic component, probable sugar binding precursor. (580 aa)    
Predicted Functional Partners:
Rmet_2234
ABC-type transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.996
Rmet_2231
ABC-type transporter, permease component.
 
 0.995
Rmet_2232
ABC-type sugar transport systems, permease component.
 
 0.991
Rmet_2233
ABC-type transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.988
Rmet_2230
Predicted small integral membrane protein.
 
    0.899
glpR
DNA-binding transcriptional repressor.
 
  
 0.715
glpD
Sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding protein.
  
  
 0.714
ugpE
Glycerol-3-phosphate transporter subunit; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
  
 
 0.676
Rmet_0008
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.662
ugpA
Glycerol-3-phosphate transporter subunit; membrane component of ABC superfamily.
  
 
 0.629
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.