STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcsCCellulose synthase subunit C. (1267 aa)    
Predicted Functional Partners:
bcsZ
endo-1,4-D-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
   
 0.957
bcsB
Cellulose synthase, cyclic di-GMP binding subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
   
 0.956
bcsA
Cellulose synthase, catalytic subunit.
 
   
 0.934
Rmet_2255
Cellulose biosynthesis protein, putative.
 
  
 0.929
bcsE
Probable protease involved in cellulose biosynthesis.
 
     0.928
bcsG
Putative endoglucanase involved in cellulose biosynthesis.
 
     0.910
Rmet_2254
Conserved hypothetical protein.
       0.678
Rmet_1804
Oxidoreductase, 2OG-Fe(II) oxygenase family.
 
     0.635
Rmet_1805
Conserved hypothetical protein.
  
     0.624
Rmet_1807
ADP-glucose pyrophosphorylase.
  
     0.618
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.