STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2294Conserved hypothetical protein. (412 aa)    
Predicted Functional Partners:
Rmet_2293
Putative regulator.
 
    0.953
Rmet_2292
Putative regulator.
 
     0.945
soj
ATPase involved in plasmid partitioning Soj.
 
     0.944
alpA
DNA-binding transcriptional activator.
 
     0.905
Rmet_2295
Conserved hypothetical protein.
 
     0.800
ssb2
Single-stranded DNA binding protein.
 
     0.785
topB2
DNA topoisomerase III.
 
   
 0.778
Rmet_2320
Conserved hypothetical protein.
 
     0.776
Rmet_2360
Conserved hypothetical protein (membrane).
  
    0.776
Rmet_2345
Conserved hypothetical protein.
  
    0.775
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.