STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssb2Single-stranded DNA binding protein. (146 aa)    
Predicted Functional Partners:
topB2
DNA topoisomerase III.
 
 
 0.994
Rmet_2295
Conserved hypothetical protein.
 
    0.910
ssb1
Single-stranded DNA-binding protein (Helix-destabilizing protein); Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
     
  0.900
rpsF
30S ribosomal subunit protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.807
Rmet_2330
Putative plasmid-related DNA/RNA helicase.
 
 
 0.799
Rmet_2292
Putative regulator.
 
  
 0.794
dnaX
DNA polymerase III tau/gamma subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 
 0.791
Rmet_2293
Putative regulator.
 
    0.789
Rmet_2294
Conserved hypothetical protein.
 
     0.785
dnaE
DNA polymerase III alpha subunit.
   
 
 0.783
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.