Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Rmet_2334 | Rmet_2345 | Putative lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.799 |
Rmet_2334 | Rmet_2349 | Putative lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.797 |
Rmet_2334 | Rmet_2350 | Putative lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.804 |
Rmet_2334 | Rmet_2351 | Putative lytic transglycosylase, catalytic. | Conserved hypothetical protein. | 0.797 |
Rmet_2334 | Rmet_2352 | Putative lytic transglycosylase, catalytic. | Putative secreted protein. | 0.797 |
Rmet_2334 | Rmet_2353 | Putative lytic transglycosylase, catalytic. | Type IV secretory pathway, VirB4 components. | 0.788 |
Rmet_2334 | Rmet_2354 | Putative lytic transglycosylase, catalytic. | Putative exported protein. | 0.740 |
Rmet_2334 | Rmet_2357 | Putative lytic transglycosylase, catalytic. | Putative exported protein. | 0.789 |
Rmet_2334 | Rmet_2358 | Putative lytic transglycosylase, catalytic. | Putative membrane protein. | 0.787 |
Rmet_2334 | Rmet_2360 | Putative lytic transglycosylase, catalytic. | Conserved hypothetical protein (membrane). | 0.791 |
Rmet_2345 | Rmet_2334 | Conserved hypothetical protein. | Putative lytic transglycosylase, catalytic. | 0.799 |
Rmet_2345 | Rmet_2349 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.938 |
Rmet_2345 | Rmet_2350 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.938 |
Rmet_2345 | Rmet_2351 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.938 |
Rmet_2345 | Rmet_2352 | Conserved hypothetical protein. | Putative secreted protein. | 0.938 |
Rmet_2345 | Rmet_2353 | Conserved hypothetical protein. | Type IV secretory pathway, VirB4 components. | 0.932 |
Rmet_2345 | Rmet_2354 | Conserved hypothetical protein. | Putative exported protein. | 0.922 |
Rmet_2345 | Rmet_2357 | Conserved hypothetical protein. | Putative exported protein. | 0.847 |
Rmet_2345 | Rmet_2358 | Conserved hypothetical protein. | Putative membrane protein. | 0.847 |
Rmet_2345 | Rmet_2360 | Conserved hypothetical protein. | Conserved hypothetical protein (membrane). | 0.846 |
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