STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2373Conserved hypothetical protein. (556 aa)    
Predicted Functional Partners:
Rmet_3427
Cytochrome subunit of sulfide dehydrogenase, Flavocytochrome c cytochrome subunit, putative soxE-like protein.
  
 0.941
soxF
Probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein.
 
 
 
0.926
cysI
Sulfite reductase, beta subunit (hemoprotein with two 4Fe-4S domains); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.918
metB
Cystathionine gamma-synthase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
    
 0.908
Rmet_2372
Putative hydroxyacylglutathione hydrolase.
 
 0.880
ccoN-2
Cytochrome-c oxidase.
  
    0.630
Rmet_2374
Hypothetical protein.
  
    0.628
Rmet_2377
Putative cytochrome c4.
  
 
 0.610
Rmet_2215
Rhodanese-related sulfurtransferase.
  
 0.582
Rmet_1599
Cytochrome c, class I precursor.
  
 
 0.553
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.