STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
armRArmR, DNA-binding response regulator (QseB); Putative sensor-kinase ArmS (part1). (222 aa)    
Predicted Functional Partners:
hmzS
Putative Signal transduction histidine kinase.
 
 0.982
evgS
Hybrid sensory histidine kinase in two-component regulatory system.
 
 0.926
envZ-2
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.828
mmfS
Periplasmic sensor signal transduction histidine kinase (Tn6048).
 
 
 0.815
Rmet_1626
Signal transduction histidine kinase.
 
 0.804
agrS
Signal transduction histidine kinase, heavy metal sensor; Member of a two-component regulatory system.
 
 0.800
Rmet_3584
Signal transduction histidine kinase.
 
 
 0.797
Rmet_0464
Putative sensory histidine kinase in two-component regulatory system with Rmet_0465.
 
 
 0.786
phhS
Sensor histidine kinase.
 
 
 0.776
Rmet_0027
Response regulator, OmpR-family.
  
    0.774
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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