STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2437Putative Rieske (2fe-2s) region harboring protein. (127 aa)    
Predicted Functional Partners:
gph-2
Phosphoglycolate phosphatase.
  
    0.802
sohB
Peptidase S49, periplasmic serine protease (ClpP class).
 
    0.728
rluC
23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.646
narH
Nitrate reductase 1, beta (Fe-S) subunit.
  
  
 0.618
soxF
Probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein.
  
 
 0.479
Rmet_2373
Conserved hypothetical protein.
  
 
 0.478
narJ
Nitrate reductase, delta subunit.
  
  
 0.434
narG
Nitrate reductase 1, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.428
Rmet_1581
Conserved hypothetical protein.
 
     0.427
narI
Nitrate reductase 1, gamma (cytochrome b(NR)) subunit.
  
  
 0.427
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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