Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
trxB2Thioredoxin reductase. (367 aa)    
Predicted Functional Partners:
trxA
Thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.706
fdxA
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
    0.617
ahpC
Alkyl hydroperoxide reductase, peroxiredoxin (Thioredoxin-dependent peroxide reductase).
  
 
 0.557
Rmet_2636
Thioredoxin domain-containing protein.
  
 
 0.548
Rmet_2654
Antioxidant protein LsfA.
  
 
 0.536
Rmet_1170
Cytochrome c biogenesis protein, transmembrane region.
  
 
 0.487
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.442
hoxO
HoxO Hydrogenase expression/formation protein hoxO (belongs to CMGI-2); Belongs to the HupG/HyaE family.
  
 
 0.432
pheT
Phenylalanine tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
 
 0.431
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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