STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2498Conserved hypothetical protein. (253 aa)    
Predicted Functional Partners:
Rmet_2497
Spermidine synthase-like protein.
  
    0.782
mmfD
Secreted protein (Tn6048).
  
    0.588
Rmet_3594
Conserved hypothetical protein.
  
    0.576
Rmet_1730
Uncharacterized protein; Major facilitator superfamily (MFS) metabolite/H+ symporter (fragment).
  
    0.540
Rmet_3475
Putative ABC-type branched-chain amino acid transport system, periplasmic component.
  
    0.528
Rmet_6528
Hypothetical protein.
       0.506
gspL
General secretion pathway protein L.
  
     0.494
Rmet_0047
Dienelactone hydrolase or related enzyme.
  
    0.453
Rmet_2683
Putative Type VI pilus assembly protein (PilW-like).
  
    0.452
Rmet_3067
Conserved hypothetical protein.
  
     0.437
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.