STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2504Gluconate 2-dehydrogenase subunit 3 precursor (GADH subunit 3) (GA 2-DH subunit 3). (273 aa)    
Predicted Functional Partners:
Rmet_2503
Gluconate 2-dehydrogenase flavoprotein precursor (GADH dehydrogenase subunit) (GA 2-DH dehydrogenase subunit).
 0.998
Rmet_2502
Gluconate 2-dehydrogenase cytochrome c subunit precursor (GADH cytochrome c subunit) (GA 2-DH cytochrome c subunit).
 
  
 0.951
purL
Phosphoribosylformyl-glycineamide synthetase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.932
tiaE
2-keto-D-gluconate reductase (glyoxalate reductase) (2-ketoaldonate reductase); Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.912
gntK
Gluconate kinase 2; gluconate transport, GNT I system.
   
 
 0.904
Rmet_1417
Cytochrome c, class I precursor.
 
  
 0.751
Rmet_1599
Cytochrome c, class I precursor.
 
  
 0.727
Rmet_2155
Cytochrome c family protein.
 
  
 0.709
Rmet_0549
Mg2+ transporter protein, CorA-like protein.
 
     0.546
Rmet_1143
Putative fusion protein (cycG-torC like aminoterminal part).
 
  
 0.543
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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