STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2511Conserved hypothetical protein. (327 aa)    
Predicted Functional Partners:
Rmet_2512
Putative endoribonuclease L-PSP (protein synthesis inhibitor).
 
    0.790
Rmet_2510
Lysine exporter protein (LYSE/YGGA) precursor.
       0.782
Rmet_2507
Transcriptional regulator, GntR family.
 
   
 0.745
Rmet_2509
Alanyl-tRNA synthetase.
  
    0.732
Rmet_2508
Conserved hypothetical protein.
       0.664
Rmet_2513
Aminotransferase family protein.
  
  
 0.623
h
Glutathione S-transferase.
 
    0.600
Rmet_6529
Hypothetical protein.
       0.485
Rmet_0204
Transcriptional regulator, GntR family, HTH:Aminotransferase, class I and II.
 
  
 0.475
Rmet_0592
Conserved hypothetical protein.
  
    0.439
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.