Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rmet_2589 | Rmet_2591 | Rmet_2589 | Rmet_2591 | Conserved hypothetical protein. | Transcriptional regulator, DeoR family. | 0.642 |
| Rmet_2589 | gstN | Rmet_2589 | Rmet_2587 | Conserved hypothetical protein. | Glutathione s-transferase protein. | 0.437 |
| Rmet_2589 | kdgT | Rmet_2589 | Rmet_2588 | Conserved hypothetical protein. | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 0.948 |
| Rmet_2589 | pdxA | Rmet_2589 | Rmet_0438 | Conserved hypothetical protein. | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.717 |
| Rmet_2589 | pdxA-2 | Rmet_2589 | Rmet_2590 | Conserved hypothetical protein. | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | 0.981 |
| Rmet_2591 | Rmet_2589 | Rmet_2591 | Rmet_2589 | Transcriptional regulator, DeoR family. | Conserved hypothetical protein. | 0.642 |
| Rmet_2591 | kdgT | Rmet_2591 | Rmet_2588 | Transcriptional regulator, DeoR family. | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 0.547 |
| Rmet_2591 | pdxA-2 | Rmet_2591 | Rmet_2590 | Transcriptional regulator, DeoR family. | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | 0.601 |
| gstN | Rmet_2589 | Rmet_2587 | Rmet_2589 | Glutathione s-transferase protein. | Conserved hypothetical protein. | 0.437 |
| gstN | kdgT | Rmet_2587 | Rmet_2588 | Glutathione s-transferase protein. | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 0.435 |
| kdgT | Rmet_2589 | Rmet_2588 | Rmet_2589 | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | Conserved hypothetical protein. | 0.948 |
| kdgT | Rmet_2591 | Rmet_2588 | Rmet_2591 | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | Transcriptional regulator, DeoR family. | 0.547 |
| kdgT | gstN | Rmet_2588 | Rmet_2587 | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | Glutathione s-transferase protein. | 0.435 |
| kdgT | pdxA | Rmet_2588 | Rmet_0438 | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.664 |
| kdgT | pdxA-2 | Rmet_2588 | Rmet_2590 | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | 0.912 |
| pdxA | Rmet_2589 | Rmet_0438 | Rmet_2589 | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Conserved hypothetical protein. | 0.717 |
| pdxA | kdgT | Rmet_0438 | Rmet_2588 | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 0.664 |
| pdxA-2 | Rmet_2589 | Rmet_2590 | Rmet_2589 | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | Conserved hypothetical protein. | 0.981 |
| pdxA-2 | Rmet_2591 | Rmet_2590 | Rmet_2591 | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | Transcriptional regulator, DeoR family. | 0.601 |
| pdxA-2 | kdgT | Rmet_2590 | Rmet_2588 | 4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase); Belongs to the PdxA family. | 2-keto-3-deoxy-D-gluconate transporter; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. | 0.912 |