STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2613Alkaline phosphatase. (679 aa)    
Predicted Functional Partners:
phoD
Phosphodiesterase/alkaline phosphatase D.
  
 
 
0.927
folB
Dihydroneopterin aldolase.
     
 0.914
ntpA
dATP pyrophosphohydrolase protein.
     
  0.900
folE2-1
Conserved hypothetical protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
     
  0.900
Rmet_1101
Putative 6-pyruvoyl-tetrahydropterin (PTP)synthase.
     
  0.900
ptpS
6-Pyruvoyl tetrahydrobiopterin synthase protein.
   
 
  0.900
folE2-2
Putative GTP cyclohydrolase; Converts GTP to 7,8-dihydroneopterin triphosphate.
     
  0.900
gcp
O-sialoglycoprotein endopeptidase (fragment); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.532
Rmet_2611
Hypothetical protein.
  
    0.528
Rmet_0810
NADH pyrophosphatase I of the Nudix family of hydrolases.
   
 
  0.501
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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