STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2628Conserved hypothetical protein. (267 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
  
    0.801
arnT
4-Amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family.
  
    0.764
Rmet_2491
Conserved hypothetical protein.
  
    0.764
Rmet_0490
Conserved hypothetical protein.
  
    0.758
Rmet_0306
Conserved hypothetical protein.
  
     0.749
Rmet_2985
Putative barstar (Ribonuclease inhibitor).
  
     0.744
Rmet_2462
Conserved hypothetical protein.
  
    0.743
Rmet_3234
Outer membrane protein (porin).
  
    0.743
Rmet_0977
Putative nucleic acid-binding protein containing PIN domain (modular protein).
  
     0.733
priB
Primosomal replication protein N (priB-like); Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
     0.733
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.