STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2671Putative yeeE-like protein. (371 aa)    
Predicted Functional Partners:
soxZ
Sulfur oxidation protein (SoxZ).
 
   
 0.787
soxA
Sulfur oxidation protein (SoxA).
 
  
 0.786
soxY
Sulfur oxidation protein (SoxY).
 
  
 0.784
soxB
Sulfur/thiosulfate oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
    0.769
soxF
Probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein.
 
    0.748
soxX
Sulfur oxidation protein (SoxX).
 
    0.730
Rmet_0234
Conserved hypothetical protein.
  
    0.709
Rmet_3421
Conserved hypothetical protein.
 
  
 0.648
queC
Queuosine biosynthesis protein queC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
  
    0.628
Rmet_0662
Putative integral membrane prtein with MHYT domain.
  
    0.591
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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