STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2684Putative Type IV pilus assembly protein (PilX-like). (186 aa)    
Predicted Functional Partners:
Rmet_2685
Putative Type IV pilus assembly protein, tip-associated adhesin (PilY1-like).
  
  
 0.882
Rmet_2683
Putative Type VI pilus assembly protein (PilW-like).
  
  
 0.877
Rmet_2686
Putative Type IV pilus assembly protein (PilE-like).
  
  
 0.869
Rmet_2687
Putative Type IV pili related protein.
  
  
 0.852
Rmet_2682
Hypothetical protein.
       0.773
ribD
Fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.684
Rmet_0189
Putative type-4 fimbrial biogenesis pilV transmembrane protein.
  
  
 0.617
ribC
Riboflavin synthase alpha chain.
       0.570
Rmet_0192
Putative type-4 fimbrial biogenesis pilY1-related protein.
  
  
 0.498
Rmet_0190
Putative type 4 fimbrial biogenesis transmembrane protein, pilW.
  
  
 0.482
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.