STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2686Putative Type IV pilus assembly protein (PilE-like). (158 aa)    
Predicted Functional Partners:
Rmet_2685
Putative Type IV pilus assembly protein, tip-associated adhesin (PilY1-like).
 
  
 0.949
Rmet_2683
Putative Type VI pilus assembly protein (PilW-like).
 
  
 0.932
Rmet_2687
Putative Type IV pili related protein.
 
  
 0.930
Rmet_2684
Putative Type IV pilus assembly protein (PilX-like).
  
  
 0.869
Rmet_2682
Hypothetical protein.
  
    0.779
pilN
Tfp pilus assembly protein PilN.
 
  
 0.700
pilM
Type IV pilus assembly protein PilM.
 
   
 0.695
Rmet_0189
Putative type-4 fimbrial biogenesis pilV transmembrane protein.
 
  
 0.692
ribD
Fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.683
pilP
Type IV pilus assembly protein PilP.
  
  
 0.656
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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