STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHDiadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (293 aa)    
Predicted Functional Partners:
fbp
Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase).
   
 0.898
Rmet_3579
Conserved hypothetical protein.
   
 0.898
Rmet_3380
Ca2+ sensor (EF-Hand superfamily).
    
 0.896
Rmet_2634
Ankyrin repeat harboring signal peptide protein.
  
 0.893
arp3
Ankyrin repeat protein (ANK).
   
 0.891
apaG
Protein associated with Co2+ and Mg2+ efflux.
  
  
 0.820
Rmet_1266
Putative RNA Modifying Enzyme.
   
 
 0.773
sspB
ClpXP protease specificity-enhancing factor.
  
    0.704
bamE
Putative small protein A (tmRNA-binding)-related protein (SmpA/OmlA fragment); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
     0.657
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
   
 0.652
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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