STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2765Conserved hypothetical protein. (202 aa)    
Predicted Functional Partners:
Rmet_2766
Conserved hypothetical protein.
 
    0.978
Rmet_2764
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
    0.915
torD
Formate dehydrogenase-specific chaperone.
 
    0.876
fdhC
Formate dehydrogenase subunit C.
 
    0.832
fdhA
Formate dehydrogenase alpha subunit (Fe4S4 domain); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.813
fdhB
Formate dehydrogenase iron-sulfur subunit.
 
    0.777
mrp
Antiporter inner membrane protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
    0.773
fdhD-3
Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
    0.714
addB
ATP-dependent nuclease, subunit B.
  
    0.617
Rmet_0895
Putative ABC-type tungstate transport system, permease component.
 
    0.602
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.