STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
repA-3Plasmid encoded RepA protein CMGI-5. (329 aa)    
Predicted Functional Partners:
traY
TraY/DotA-like type IV secretion system protein.
 
  
 0.845
Rmet_2826
Hypothetical protein; putative exported protein.
  
    0.776
Rmet_2824
Conserved hypothetical protein.
       0.773
Rmet_6560
Hypothetical protein.
       0.773
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B.
   
  
 0.679
Rmet_0995
Putative transmembrane protein.
  
     0.579
Rmet_2966
Response regulator containing an atypical phosphorylation pocket.
  
    0.562
Rmet_3540
Conserved hypothetical protein.
  
     0.557
addB
ATP-dependent nuclease, subunit B.
  
    0.524
Rmet_2687
Putative Type IV pili related protein.
  
    0.440
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.