STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_2906Conserved hypothetical protein. (282 aa)    
Predicted Functional Partners:
mviN
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.772
Rmet_2985
Putative barstar (Ribonuclease inhibitor).
  
     0.623
Rmet_6565
Hypothetical protein.
       0.550
Rmet_0296
Peptidase S16, lon-like protein.
 
    0.532
Rmet_0384
Putative transcriptional regulator, TetR/AcrR-family.
  
    0.528
Rmet_0744
Putative membrane protein.
 
    0.508
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
  
    0.486
Rmet_0260
Conserved hypothetical protein; putative transmembrane protein.
  
    0.453
Rmet_2491
Conserved hypothetical protein.
  
    0.430
Rmet_0490
Conserved hypothetical protein.
  
    0.425
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.