STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmfAPropeptide, PepSY amd peptidase M4 (Tn6048); Transposase (fragment) Tn3 family. (111 aa)    
Predicted Functional Partners:
mmfB
Undecaprenyl pyrophosphate phosphatase (Tn6048).
  
  
 0.877
mmfC1
Putative permease MFS (Tn6048).
  
  
 0.829
mmfS
Periplasmic sensor signal transduction histidine kinase (Tn6048).
  
  
 0.821
mmfD
Secreted protein (Tn6048).
  
  
 0.813
mmfC2
Putative permease of the Major Facilitator Superfamily (Tn6048).
  
  
 0.805
mmfR
Two component transcriptional regulator, winged helix family (Tn6048).
  
  
 0.796
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.