STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmfDSecreted protein (Tn6048). (149 aa)    
Predicted Functional Partners:
mmfC1
Putative permease MFS (Tn6048).
  
 0.986
mmfC2
Putative permease of the Major Facilitator Superfamily (Tn6048).
  
 0.980
mmfS
Periplasmic sensor signal transduction histidine kinase (Tn6048).
 
  
 0.952
mmfR
Two component transcriptional regulator, winged helix family (Tn6048).
 
  
 0.913
mmfB
Undecaprenyl pyrophosphate phosphatase (Tn6048).
 
  
 0.885
mmfA
Propeptide, PepSY amd peptidase M4 (Tn6048); Transposase (fragment) Tn3 family.
  
  
 0.813
Rmet_3006
Conserved hypothetical protein; putative membrane protein (Tn6048).
  
    0.619
Rmet_0598
Ser/Thr protein phosphatase family protein.
  
    0.596
Rmet_2498
Conserved hypothetical protein.
  
    0.588
Rmet_0596
Putative transmembrane transcriptional regulator (Anti-sigma factor).
  
    0.546
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.