STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tniBNTP-binding protein TniB (Tn6048). (302 aa)    
Predicted Functional Partners:
tniA
Transposase (Tn6048).
 
   
 0.985
tniQ
Transposon related protein TniQ (Tn6048).
  
 
 0.942
tniR
Serine-based site-specific recombinase activity (resolvase) (Tn6048).
 
   
 0.928
tnpA-12
Transposase IS1071.
  
     0.748
tnpA-14
Transposase (part 1).
  
     0.748
tnpA-16
Fragment of fructose-bisphosphate aldolase (cbbA).
  
     0.748
hmzB
Cation/multidrug efflux system, membrane-fusion component (modular protein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
   0.702
hmzA
RND divalent metal cation efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.697
tnpR
Serine--based site-specific recombinase.
 
   
 0.434
tnmA
Transposase Tn6049.
 
     0.408
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.