STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3161Conserved hypothetical protein. (306 aa)    
Predicted Functional Partners:
Rmet_0888
Fatty acid desaturase.
  
    0.537
Rmet_0490
Conserved hypothetical protein.
  
    0.531
Rmet_0260
Conserved hypothetical protein; putative transmembrane protein.
  
     0.461
Rmet_0234
Conserved hypothetical protein.
  
    0.455
Rmet_0906
Putative acetyltransferase and hydrolase with the alpha/beta hydrolase fold.
 
    0.454
Rmet_0587
Excisionase/Xis, DNA-binding protein.
  
    0.436
Rmet_2638
Putative ATP-ase.
  
     0.421
Rmet_3542
Hypothetical protein.
  
    0.418
Rmet_1219
Hypothetical protein.
  
    0.416
Rmet_1218
Putative phosphoanhydride phosphorylase.
  
    0.411
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.