STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norRDNA-binding transcriptional activator. (525 aa)    
Predicted Functional Partners:
rpoN
RNA polymerase sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.806
norB
Nitric oxide reductase large subunit.
 
  
 0.710
Rmet_6581
Hypothetical protein.
       0.671
ahpD
Alkyl hydroperoxide reductase D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
     
 0.551
Rmet_1195
PAS/PAC sensor signal transduction histidine kinase.
  
 
 0.514
evgS
Hybrid sensory histidine kinase in two-component regulatory system.
  
 
 0.469
hmp
Nitric oxide dioxygenase; Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (NO oxygenase) (NOD); Belongs to the globin family.
  
  
 0.451
modE
DNA-binding transcriptional dual regulator.
  
  
 0.448
Rmet_0591
Putative signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
   
 
 0.444
prpR
Propionate catabolism activator.
 
  
0.444
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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