STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nirSNitrite reductase precursor (Cytochrome cd1) (Cytochrome oxidase) (Hydroxylamine reductase). (549 aa)    
Predicted Functional Partners:
norB
Nitric oxide reductase large subunit.
  
 0.996
narG
Nitrate reductase 1, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.970
nirJ-2
Heme d1 biosynthesis protein NirJ.
 
  
 0.964
narH
Nitrate reductase 1, beta (Fe-S) subunit.
  
 0.949
soxX
Sulfur oxidation protein (SoxX).
  
  
 0.938
nirH
Nitrite reductase heme biosynthesis H protein.
 
    0.911
Rmet_2072
Major facilitator superfamily MFS_1.
   
 
 0.910
narK
Nitrate/nitrite transporter.
   
 
 0.910
narI
Nitrate reductase 1, gamma (cytochrome b(NR)) subunit.
  
 
 0.904
nirC
Cytochrome c55X (precursor).
 
  
 0.902
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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