STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltAMembrane-bound lytic murein transglycosylase. (382 aa)    
Predicted Functional Partners:
hrpA
ATP-dependent helicase.
      
 0.680
pilQ
Pili assembly protein PilQ.
   
  
 0.600
Rmet_3174
Conserved hypothetical protein.
  
    0.558
nirS
Nitrite reductase precursor (Cytochrome cd1) (Cytochrome oxidase) (Hydroxylamine reductase).
       0.439
Rmet_3056
Exoribonuclease II (RNB)-family protein.
  
     0.426
nirE
Uroporphyrin-III C-methyltransferase (Urogen III methylase) (SUMT) (Uroporphyrinogen III methylase) (UROM).
     
 0.418
nirN
Nitrite reductase (NO-forming).
       0.413
nirJ-2
Heme d1 biosynthesis protein NirJ.
       0.413
nirM
Cytochrome c-551 precursor (Cytochrome c551) (Cytochrome C8).
       0.413
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.