Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rmet_2634 | Rmet_3233 | Rmet_2634 | Rmet_3233 | Ankyrin repeat harboring signal peptide protein. | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 0.459 |
| Rmet_2634 | glpK | Rmet_2634 | Rmet_2238 | Ankyrin repeat harboring signal peptide protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.555 |
| Rmet_3232 | Rmet_3233 | Rmet_3232 | Rmet_3233 | Conserved hypothetical protein; putative metal-binding protein. | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 0.609 |
| Rmet_3233 | Rmet_2634 | Rmet_3233 | Rmet_2634 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Ankyrin repeat harboring signal peptide protein. | 0.459 |
| Rmet_3233 | Rmet_3232 | Rmet_3233 | Rmet_3232 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Conserved hypothetical protein; putative metal-binding protein. | 0.609 |
| Rmet_3233 | arp3 | Rmet_3233 | Rmet_1824 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Ankyrin repeat protein (ANK). | 0.460 |
| Rmet_3233 | evgS | Rmet_3233 | Rmet_2154 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Hybrid sensory histidine kinase in two-component regulatory system. | 0.525 |
| Rmet_3233 | glpK | Rmet_3233 | Rmet_2238 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.623 |
| Rmet_3233 | gltB | Rmet_3233 | Rmet_3263 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Glutamate synthase, large subunit. | 0.438 |
| Rmet_3233 | rplI | Rmet_3233 | Rmet_1976 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 50S ribosomal subunit protein L9; Binds to the 23S rRNA. | 0.467 |
| Rmet_3233 | rseA | Rmet_3233 | Rmet_2424 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Anti-sigma factor, negative regulator of sigma24 activity. | 0.773 |
| Rmet_3233 | yaeL | Rmet_3233 | Rmet_1442 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Zinc metallopeptidase. | 0.462 |
| Rmet_3233 | yfjF | Rmet_3233 | Rmet_1458 | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | Conserved hypothetical protein; Belongs to the UPF0125 (RnfH) family. | 0.442 |
| arp3 | Rmet_3233 | Rmet_1824 | Rmet_3233 | Ankyrin repeat protein (ANK). | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 0.460 |
| arp3 | glpK | Rmet_1824 | Rmet_2238 | Ankyrin repeat protein (ANK). | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.555 |
| evgS | Rmet_3233 | Rmet_2154 | Rmet_3233 | Hybrid sensory histidine kinase in two-component regulatory system. | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 0.525 |
| evgS | glpK | Rmet_2154 | Rmet_2238 | Hybrid sensory histidine kinase in two-component regulatory system. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.428 |
| evgS | gltB | Rmet_2154 | Rmet_3263 | Hybrid sensory histidine kinase in two-component regulatory system. | Glutamate synthase, large subunit. | 0.563 |
| glpK | Rmet_2634 | Rmet_2238 | Rmet_2634 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Ankyrin repeat harboring signal peptide protein. | 0.555 |
| glpK | Rmet_3233 | Rmet_2238 | Rmet_3233 | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | Trypsin-like serine protease (contains C-terminal PDZ domain); Belongs to the peptidase S1C family. | 0.623 |
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