Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rmet_0995 | tatA | Rmet_0995 | Rmet_3237 | Putative transmembrane protein. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.584 |
| Rmet_0995 | tatB | Rmet_0995 | Rmet_3236 | Putative transmembrane protein. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.585 |
| Rmet_3234 | tatB | Rmet_3234 | Rmet_3236 | Outer membrane protein (porin). | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.567 |
| Rmet_3234 | tatC | Rmet_3234 | Rmet_3235 | Outer membrane protein (porin). | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.461 |
| Rmet_3238 | hisE | Rmet_3238 | Rmet_3240 | Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT (histidine triad) family hydrolase. | Phosphoribosyl-ATP pyrophosphatase. | 0.499 |
| Rmet_3238 | tatA | Rmet_3238 | Rmet_3237 | Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT (histidine triad) family hydrolase. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.602 |
| Rmet_3238 | tatB | Rmet_3238 | Rmet_3236 | Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT (histidine triad) family hydrolase. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.500 |
| guaA | pheA | Rmet_1463 | Rmet_0716 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Prephenate dehydratase, Chorismate mutase. | 0.545 |
| guaA | tatA | Rmet_1463 | Rmet_3237 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.949 |
| guaA | tatB | Rmet_1463 | Rmet_3236 | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.949 |
| hisE | Rmet_3238 | Rmet_3240 | Rmet_3238 | Phosphoribosyl-ATP pyrophosphatase. | Diadenosine tetraphosphate (Ap4A) hydrolase or other HIT (histidine triad) family hydrolase. | 0.499 |
| hisE | tatA | Rmet_3240 | Rmet_3237 | Phosphoribosyl-ATP pyrophosphatase. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.706 |
| hisE | tatB | Rmet_3240 | Rmet_3236 | Phosphoribosyl-ATP pyrophosphatase. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.516 |
| holA | tatB | Rmet_2971 | Rmet_3236 | DNA polymerase III, delta subunit. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.513 |
| pheA | guaA | Rmet_0716 | Rmet_1463 | Prephenate dehydratase, Chorismate mutase. | GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP. | 0.545 |
| pheA | tatA | Rmet_0716 | Rmet_3237 | Prephenate dehydratase, Chorismate mutase. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.420 |
| pheA | tatB | Rmet_0716 | Rmet_3236 | Prephenate dehydratase, Chorismate mutase. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.513 |
| secG | tatA | Rmet_0926 | Rmet_3237 | Preprotein translocase membrane subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.822 |
| secG | tatB | Rmet_0926 | Rmet_3236 | Preprotein translocase membrane subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Sec-independent protein translocase component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.798 |
| tatA | Rmet_0995 | Rmet_3237 | Rmet_0995 | TatABCE protein translocation system subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Putative transmembrane protein. | 0.584 |
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