STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadGPutative transporter subunit: ATP-binding component of ABC superfamily. (316 aa)    
Predicted Functional Partners:
Rmet_3252
Putative transporter subunit: membrane component of ABC superfamily.
  
 0.973
Rmet_3251
Putative DNA-binding transcriptional regulator (BolA-like protein); Belongs to the BolA/IbaG family.
       0.695
ybhS
Putative transporter subunit: permease component of ABC superfamily.
  
 0.676
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily.
    
0.675
ybhR
Permease component of ABC superfamily (CMGI-2).
  
 0.566
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.547
nodJ
Nodulation protein J.
 
  
 0.515
ttg2D
ABC-type transporter, auxilary periplasmic component involved in toluene tolerance.
 
    0.499
Rmet_0348
ABC-type multidrug transporter, permease component.
 
  
 0.469
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
  
  
 0.460
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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