STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilOType IV pilus assembly protein PilO. (223 aa)    
Predicted Functional Partners:
pilN
Tfp pilus assembly protein PilN.
 
 
 0.997
pilP
Type IV pilus assembly protein PilP.
 
 
 0.995
pilQ
Pili assembly protein PilQ.
 
 
 0.991
pilM
Type IV pilus assembly protein PilM.
 
 
 0.990
Rmet_3566
Conserved hypothetical protein (putative peptidoglycan-binding domain, LysM-type).
 
   0.869
pilF
Type IV pilus biogenesis protein PilF.
  
  
 0.830
Rmet_2470
Type IV-pili assembly fimV-related transmembrane protein.
  
  
 0.817
pilJ
Type IV pilus transmembrane protein PilJ.
  
  
 0.801
pilU
PilU, Type IV pilus twitching motility protein.
 
  
 0.801
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
   
 0.799
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.