STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilNTfp pilus assembly protein PilN. (214 aa)    
Predicted Functional Partners:
pilM
Type IV pilus assembly protein PilM.
 
 
 0.999
pilQ
Pili assembly protein PilQ.
 
 
 0.997
pilP
Type IV pilus assembly protein PilP.
 
 
 0.997
pilO
Type IV pilus assembly protein PilO.
 
 
 0.997
Rmet_3566
Conserved hypothetical protein (putative peptidoglycan-binding domain, LysM-type).
  
   0.868
pilF
Type IV pilus biogenesis protein PilF.
  
  
 0.833
Rmet_2470
Type IV-pili assembly fimV-related transmembrane protein.
  
  
 0.830
pilJ
Type IV pilus transmembrane protein PilJ.
  
  
 0.829
Rmet_0193
Putative Type-4 pilus assembly protein PilE (pilE1).
 
  
 0.811
pilZ
Type IV fimbrial biogenesis protein PilZ.
  
   
 0.807
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.