STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3330Cytochrome c, class I precursor (c553-like). (109 aa)    
Predicted Functional Partners:
Rmet_3331
Cytochrome c, class I:Cytochrome d1, heme region precursor.
 
  
 0.817
petC
Cytochrome c1 precursor (transmembrane protein).
 
  
 0.752
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit (Rieske Fe-S protein); Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.677
petB
Cytochrome b subunit, Ubiquinol-cytochrome-c reductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.662
soxF
Probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein.
 
 
 0.524
Rmet_3473
Cytochrome c family protein.
 
   
 0.522
Rmet_2155
Cytochrome c family protein.
 
  
 0.510
Rmet_3332
Hypothetical protein.
  
    0.503
ccoO
Cbb3-type cytochrome oxidase, monoheme subunit II.
 
 
 0.497
ccoO-2
Cytochrome C oxidase, mono-heme subunit.
 
 
 0.492
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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