Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rmet_0543 | boxB | Rmet_0543 | Rmet_1221 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | benzoyl-CoA oxygenase component B. | 0.424 |
Rmet_0543 | paaA | Rmet_0543 | Rmet_3369 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.740 |
Rmet_0543 | paaB | Rmet_0543 | Rmet_3370 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.745 |
Rmet_0543 | paaC | Rmet_0543 | Rmet_3371 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.739 |
Rmet_0543 | paaD | Rmet_0543 | Rmet_3372 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.764 |
Rmet_0543 | paaI | Rmet_0543 | Rmet_3164 | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | Phenylacetate pathway hotdog-fold thioesterase. | 0.491 |
boxB | Rmet_0543 | Rmet_1221 | Rmet_0543 | benzoyl-CoA oxygenase component B. | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | 0.424 |
boxB | paaB | Rmet_1221 | Rmet_3370 | benzoyl-CoA oxygenase component B. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.637 |
boxB | paaD | Rmet_1221 | Rmet_3372 | benzoyl-CoA oxygenase component B. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.400 |
boxB | paaJ | Rmet_1221 | Rmet_3373 | benzoyl-CoA oxygenase component B. | Subunit of the phenylacetyl-CoA oxygenase/reductase. | 0.430 |
paaA | Rmet_0543 | Rmet_3369 | Rmet_0543 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | 0.740 |
paaA | paaB | Rmet_3369 | Rmet_3370 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.999 |
paaA | paaC | Rmet_3369 | Rmet_3371 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.999 |
paaA | paaD | Rmet_3369 | Rmet_3372 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | 0.997 |
paaA | paaG-2 | Rmet_3369 | Rmet_3163 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | acyl-CoA hydratase. | 0.966 |
paaA | paaI | Rmet_3369 | Rmet_3164 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Phenylacetate pathway hotdog-fold thioesterase. | 0.985 |
paaA | paaJ | Rmet_3369 | Rmet_3373 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Subunit of the phenylacetyl-CoA oxygenase/reductase. | 0.995 |
paaA | paaK | Rmet_3369 | Rmet_0220 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Phenylacetate--CoA ligase. | 0.922 |
paaA | paaK-2 | Rmet_3369 | Rmet_3165 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | phenylacetyl-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.967 |
paaB | Rmet_0543 | Rmet_3370 | Rmet_0543 | Putative multicomponent oxygenase/reductase subunit for phenylacetic acid degradation. | Putative Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region. | 0.745 |
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