STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3399Putative Permease of the major facilitator superfamily MFS_1. (417 aa)    
Predicted Functional Partners:
mosC
Permease Membrane protein mosC Major facilitator superfamily MFS_1.
  
    0.563
Rmet_3398
Glyoxalase/bleomycin resistance protein/ring-cleaving dioxygenase.
  
  
 0.524
ypeA
Putative acyltransferase with acyl-CoA N-acyltransferase domain.
       0.445
Rmet_2687
Putative Type IV pili related protein.
  
    0.438
Rmet_1730
Uncharacterized protein; Major facilitator superfamily (MFS) metabolite/H+ symporter (fragment).
  
     0.420
Rmet_2890
Putative glyoxalase (bleomycin resistance protein), dioxygenase superfamily.
  
  
 0.415
porG
Pyruvate-flavodoxin oxidoreductase.
 
  
 0.412
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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