STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3458Conserved hypothetical protein, putative transmembrane protein. (514 aa)    
Predicted Functional Partners:
Rmet_3459
Conserved hypothetical protein, putative transmembrane protein.
 
  
 0.973
Rmet_3460
Conserved hypothetical protein; putative transmembrane protein.
 
    0.894
speE-2
Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY); Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
    0.879
Rmet_3462
Conserved hypothetical protein.
 
    0.848
speH
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC) (SamDC); Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
 
    0.813
Rmet_0664
Conserved hypothetical protein.
  
  
 0.770
Rmet_1674
Putative membrane protein precursor.
  
    0.516
Rmet_0630
Putative sel1-like repeat; harboring protein.
  
    0.460
Rmet_0628
Putative sel1-like repeat; harboring protein.
  
    0.445
Rmet_1101
Putative 6-pyruvoyl-tetrahydropterin (PTP)synthase.
  
     0.428
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.