STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3528Aldo/keto reductase. (332 aa)    
Predicted Functional Partners:
pbpC
Fused transglycosylase; transpeptidase; penicillin binding protein.
  
    0.607
Rmet_3081
Oxidoreductase (2,5-didehydrogluconate reductase).
 
 
0.580
Rmet_3527
Ornithine cyclodeaminase.
  
    0.546
Rmet_3541
Aquaporin-like precursor; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.536
Rmet_3530
Conserved hypothetical protein.
  
    0.502
Rmet_3531
Large extracellular alpha-helicalprotein.
       0.495
abmA
2-aminobenzoyl-CoA monooxygenase/reductase.
  
  
 0.428
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.