STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tctBComponent of transporter, tripartite tricarboxylate transport (TTT) family. (182 aa)    
Predicted Functional Partners:
tctA
Tricarboxylate transport protein TctA.
 
  
 0.970
tctC
Periplasmic tricarboxylate binding receptor (TctC).
 
  
 0.859
bug-27
Extra-cytoplasmic Solute Receptor.
 
  
 0.814
bug-4
Extra-cytoplasmic Solute Receptor protein.
 
  
 0.802
Rmet_1740
Putative membrane protein.
  
     0.704
cbbJ1
Triosephosphate isomerase (CbbJ); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
  
 0.679
cbbJ2
Triosephosphate isomerase (cbbJ); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      
 0.678
Rmet_0825
Conserved hypothetical protein.
 
  
 0.667
Rmet_3196
Conserved hypothetical protein.
  
     0.633
Rmet_1952
GCN5-related N-acetyltransferase.
  
     0.631
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.