STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3554FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (493 aa)    
Predicted Functional Partners:
Rmet_2636
Thioredoxin domain-containing protein.
  
 
 0.941
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.927
h
Glutathione S-transferase.
  
 0.927
Rmet_3122
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
 
  
 0.927
Rmet_0018
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 0.924
gpo
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 0.924
gst
Glutathione S-transferase.
   
 0.913
gst-2
Glutathione S-transferase.
   
 0.913
gst1
Glutathione S-transferase.
   
 0.913
gst-1
Glutathione S-transferase; Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase.
   
 0.913
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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