STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3568Conserved hypothetical protein. (129 aa)    
Predicted Functional Partners:
Rmet_2697
Transglycosylase SLT domain protein.
  
   0.780
Rmet_2538
Outer membrane protein (porin).
  
    0.763
Rmet_0919
Lipoprotein.
  
     0.760
Rmet_1733
Outer membrane protein (porin).
  
     0.756
Rmet_2770
Putative lipoprotein.
  
     0.720
topB
DNA topoisomerase III.
 
   0.720
Rmet_3234
Outer membrane protein (porin).
  
    0.719
arnT
4-Amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family.
  
    0.714
Rmet_1639
Outer membrane protein (porin).
  
     0.712
Rmet_0880
Putative outer membrane protein (porin).
  
     0.707
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.