STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
topBDNA topoisomerase III. (891 aa)    
Predicted Functional Partners:
recQ
ATP-dependent DNA helicase.
 
 0.966
Rmet_3568
Conserved hypothetical protein.
 
   0.720
parA
ATPase involved in plasmid partitioning.
     
 0.698
parA-2
ATPase involved in plasmid partitioning ParA.
     
 0.698
cbiA
Cobyrinic acid a,c-diamide synthase.
  
  
 0.698
parA-3
ATPase involved in plasmid partitioning ParA.
     
 0.698
parA-4
ATPase involved in chromosome partitioning.
     
 0.696
polA
Fused DNA polymerase I 5'->3' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.692
Rmet_2830
Hypothetical protein.
  
 0.667
gltB
Glutamate synthase, large subunit.
  
  
 0.663
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.