STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rmet_3586Putative iron ABC transporter periplasmic solute-binding protein precursor. (371 aa)    
Predicted Functional Partners:
Rmet_3584
Signal transduction histidine kinase.
     0.913
Rmet_1626
Signal transduction histidine kinase.
     0.895
Rmet_0464
Putative sensory histidine kinase in two-component regulatory system with Rmet_0465.
     0.720
Rmet_3585
Putative two-component response regulator.
 
   
 0.570
phnW
2-aminoethylphosphonate-pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
  
 0.475
dctB
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
  
    0.435
Rmet_0100
Putative periplasmic metal ion binding protein.
 
  
 0.434
Rmet_0564
Conserved hypothetical protein.
  
    0.403
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.