STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A0001Transporter, CPA2 family; TC 2.A.37. (401 aa)    
Predicted Functional Partners:
Bxe_A0002
Conserved hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.806
Bxe_A1917
Putative NAD(P)H dehydrogenase, quinone family.
  
 
 0.763
Bxe_A1675
Putative membrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.650
Bxe_A3484
Conserved hypothetical protein.
  
     0.649
Bxe_A1079
Anti sigma-E protein, RseA.
  
     0.636
Bxe_A0145
flgG; flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.624
Bxe_A4237
Conserved hypothetical protein.
  
     0.622
Bxe_A3702
Polysaccharide exporter, PST Family.
  
  
 0.614
Bxe_A1616
Putative exported protein.
 
     0.591
Bxe_A4222
Conserved hypothetical protein.
 
     0.584
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.