STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A0073Putative ISRSO11-transposase orfA protein. (175 aa)    
Predicted Functional Partners:
Bxe_A1714
Putative transposase.
 
     0.615
Bxe_A0072
Hypothetical protein.
       0.608
Bxe_C0806
Putative transposase IS3/IS911.
 
     0.563
Bxe_A2546
Putative IS1 transposase, InsB.
 
     0.452
Bxe_A3769
Putative transposase.
 
     0.425
Bxe_A1846
Putative transposase.
 
     0.423
Bxe_A2087
Putative IS3 Family transposase orfB; Citation: McAdam,R.A., Hermans,P.W., vanSoolingen, D.,et al Mol. Microbiol. 4 (9), 1607-1613 (1990).
 
     0.423
Bxe_A2544
Putative IS3 family element, transposase orfB.
 
     0.423
Bxe_A2735
Putative IS3 transposase integrase.
 
     0.423
Bxe_A3565
Putative transposase.
 
     0.423
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.