Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A0065 | Bxe_A0079 | Putative transposase. | Conserved hypothetical protein. | 0.779 |
Bxe_A0077 | Bxe_A0079 | Putative ISPpu13, transposase Orf2. | Conserved hypothetical protein. | 0.894 |
Bxe_A0077 | Bxe_A0080 | Putative ISPpu13, transposase Orf2. | Putative ISPpu14, transposase Orf1. | 0.548 |
Bxe_A0079 | Bxe_A0065 | Conserved hypothetical protein. | Putative transposase. | 0.779 |
Bxe_A0079 | Bxe_A0077 | Conserved hypothetical protein. | Putative ISPpu13, transposase Orf2. | 0.894 |
Bxe_A0079 | Bxe_A0080 | Conserved hypothetical protein. | Putative ISPpu14, transposase Orf1. | 0.780 |
Bxe_A0079 | Bxe_A0259 | Conserved hypothetical protein. | Transposase. | 0.778 |
Bxe_A0079 | Bxe_A1727 | Conserved hypothetical protein. | Transposase. | 0.779 |
Bxe_A0079 | Bxe_A2416 | Conserved hypothetical protein. | Transposase ISPpu14 orf3 like, IS66 family. | 0.777 |
Bxe_A0079 | Bxe_A2591 | Conserved hypothetical protein. | Putative transposase, TnpC. | 0.778 |
Bxe_A0079 | Bxe_A3736 | Conserved hypothetical protein. | Putative transposase. | 0.779 |
Bxe_A0079 | Bxe_A3778 | Conserved hypothetical protein. | Hypothetical protein. | 0.778 |
Bxe_A0079 | Bxe_C0805 | Conserved hypothetical protein. | Putative transposase IS66. | 0.778 |
Bxe_A0080 | Bxe_A0077 | Putative ISPpu14, transposase Orf1. | Putative ISPpu13, transposase Orf2. | 0.548 |
Bxe_A0080 | Bxe_A0079 | Putative ISPpu14, transposase Orf1. | Conserved hypothetical protein. | 0.780 |
Bxe_A0259 | Bxe_A0079 | Transposase. | Conserved hypothetical protein. | 0.778 |
Bxe_A1727 | Bxe_A0079 | Transposase. | Conserved hypothetical protein. | 0.779 |
Bxe_A2416 | Bxe_A0079 | Transposase ISPpu14 orf3 like, IS66 family. | Conserved hypothetical protein. | 0.777 |
Bxe_A2591 | Bxe_A0079 | Putative transposase, TnpC. | Conserved hypothetical protein. | 0.778 |
Bxe_A3736 | Bxe_A0079 | Putative transposase. | Conserved hypothetical protein. | 0.779 |
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