STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A1297Conserved hypothetical protein. (306 aa)    
Predicted Functional Partners:
Bxe_A4152
TC 4.A.1.1.2; TC 4.A.1.1.2.
    
 0.758
Bxe_A1610
Conserved hypothetical lipoprotein.
  
  
  0.729
Bxe_A4153
PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1; Belongs to the PEP-utilizing enzyme family.
    
 0.678
Bxe_A3702
Polysaccharide exporter, PST Family.
  
     0.674
Bxe_A3410
Uroporphyrinogen III synthase HEM4.
 
    0.638
Bxe_A0646
Conserved hypothetical protein.
  
     0.602
Bxe_A4260
Conserved hypothetical protein.
  
  
  0.598
glk
Glucokinase; In the N-terminal section; belongs to the bacterial glucokinase family.
    
 0.592
Bxe_A0784
Putative aldo/keto reductase family oxidoreductase.
  
 
 0.577
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
   
 0.569
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.