STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A1380Putative oxygenase. (166 aa)    
Predicted Functional Partners:
Bxe_A1429
Dihydropyrimidine dehydrogenase (NADP+) / dihydroorotate oxidase B, catalytic subunit.
  
 
  0.791
Bxe_B1657
cob(II)yrinic acid a,c-diamide reductase.
  
 
 0.738
Bxe_B1853
Nitroreductase family protein.
  
 
 0.726
Bxe_A0808
FMN adenylyltransferase; Belongs to the ribF family.
    
  0.723
Bxe_A1381
Putative xenobiotic compound monooxygenase, DszA family, A subunit.
  
 
  0.714
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 
  0.668
ssuD-2
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
  
 
  0.668
Bxe_A1379
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
       0.596
Bxe_A0829
Putative Ferredoxin--NAD(+) oxidoreductase.
  
 
  0.572
Bxe_A1828
Putative CDP-6-deoxy-delta-3,4- glucoseen reductase.
  
 
  0.572
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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