Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bxe_A0935 | Bxe_A1566 | Bxe_A0935 | Bxe_A1566 | Conserved hypothetical signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC lipoprotein efflux pump, inner membrane subunit. | 0.891 |
| Bxe_A0935 | Bxe_B1641 | Bxe_A0935 | Bxe_B1641 | Conserved hypothetical signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC liporpotein exporter, fused inner membrane subunits. | 0.891 |
| Bxe_A0935 | lolD | Bxe_A0935 | Bxe_A1567 | Conserved hypothetical signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.909 |
| Bxe_A1566 | Bxe_A0935 | Bxe_A1566 | Bxe_A0935 | ABC lipoprotein efflux pump, inner membrane subunit. | Conserved hypothetical signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.891 |
| Bxe_A1566 | Bxe_A1568 | Bxe_A1566 | Bxe_A1568 | ABC lipoprotein efflux pump, inner membrane subunit. | Putative TatD-related deoxyribonuclease. | 0.692 |
| Bxe_A1566 | Bxe_C0647 | Bxe_A1566 | Bxe_C0647 | ABC lipoprotein efflux pump, inner membrane subunit. | Conserved hypothetical protein. | 0.891 |
| Bxe_A1566 | lolA | Bxe_A1566 | Bxe_A3440 | ABC lipoprotein efflux pump, inner membrane subunit. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.984 |
| Bxe_A1566 | lolD | Bxe_A1566 | Bxe_A1567 | ABC lipoprotein efflux pump, inner membrane subunit. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.999 |
| Bxe_A1568 | Bxe_A1566 | Bxe_A1568 | Bxe_A1566 | Putative TatD-related deoxyribonuclease. | ABC lipoprotein efflux pump, inner membrane subunit. | 0.692 |
| Bxe_A1568 | lolD | Bxe_A1568 | Bxe_A1567 | Putative TatD-related deoxyribonuclease. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.769 |
| Bxe_A1568 | rsmA | Bxe_A1568 | Bxe_A4021 | Putative TatD-related deoxyribonuclease. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.443 |
| Bxe_A3150 | Bxe_A3152 | Bxe_A3150 | Bxe_A3152 | Oxidase-dependent Fe2+ Transporter, (OFeT)Family, FTR1-like protein. | Putative exported protein. | 0.988 |
| Bxe_A3150 | lolD | Bxe_A3150 | Bxe_A1567 | Oxidase-dependent Fe2+ Transporter, (OFeT)Family, FTR1-like protein. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.767 |
| Bxe_A3152 | Bxe_A3150 | Bxe_A3152 | Bxe_A3150 | Putative exported protein. | Oxidase-dependent Fe2+ Transporter, (OFeT)Family, FTR1-like protein. | 0.988 |
| Bxe_A3152 | lolD | Bxe_A3152 | Bxe_A1567 | Putative exported protein. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.806 |
| Bxe_B1641 | Bxe_A0935 | Bxe_B1641 | Bxe_A0935 | ABC liporpotein exporter, fused inner membrane subunits. | Conserved hypothetical signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.891 |
| Bxe_B1641 | Bxe_C0647 | Bxe_B1641 | Bxe_C0647 | ABC liporpotein exporter, fused inner membrane subunits. | Conserved hypothetical protein. | 0.891 |
| Bxe_B1641 | lolA | Bxe_B1641 | Bxe_A3440 | ABC liporpotein exporter, fused inner membrane subunits. | Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.956 |
| Bxe_B1641 | lolD | Bxe_B1641 | Bxe_A1567 | ABC liporpotein exporter, fused inner membrane subunits. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.993 |
| Bxe_C0194 | lolD | Bxe_C0194 | Bxe_A1567 | ABC peptide/opine/nickel family transporter, ATPase subunit. | ABC lipoprotein efflux pump, ATPase subunit; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.819 |
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